Advanced Organic Chemistry: Mass spectrum of 2-chloropropane CH3CHClCH3

Interpreting and explaining the mass spectrum of 2-chloropropane

[Author ©  Dr Phil Brown PhD: Doc Brown's advanced level organic chemistry exam revision notes suitable for students of UK A level chemistry courses & US K12 grade 11, grade 12 and AP honors chemistry courses: Molecular spectrometry - analysing the mass spectrum of 2-chloropropane [updated Mar 12th 2026 *]

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Introductory note on the mass spectrum of 2-chloropropane

Students and teachers please note my explanation of the mass spectrum of 2-chloropropane is designed for advanced, but pre-university, chemistry courses.

If M represents the 2-chloropropane molecule, the initial ionisation to give the molecular ion is:

M(g) + high KE e-  ==> [M]+(g) + 2e- and for fragmentation equations assume [M]+ is the start of the processes and all species are in a gaseous state.

I've not usually shown an unpaired electron on e.g. an ion or a non-ionised alkyl radical R e.g.

[M]+ ==> [X]+  +  R, but you should be aware this is a more accurate depiction of some processes.

I've used simplified equations to show how some of the ions that might be formed in the fragmentation pattern for the mass spectrum of 2-chloropropane and only the formation of singly charged positive are considered for the mass spectrum of 2-chloropropane.

I've included a stick diagram and table of m/z ions for the mass spectrum of 2-chloropropane and doing the mass spectrum analysis under standard conditions, databases can be compiled based on complex fingerprint patterns, often involving the relative intensities of many fragment ions, and used to identify compounds including 2-chloropropane.

In selected cases, where two different fragment ions have the same integer m/z value, I've pointed out that modern mass spectrometers can measure relative ion mass to four decimal places. So, using accurate isotopic masses, I've calculated the accurate ion masses, BUT strictly speaking, 0.0005 should be deducted for singly charged ions to account for the loss of the electron in their formation. I have NOT done this, but the mass spectrometer software does!

C3H7Cl CH3CHClCH3 mass spectrum of 2-chloropropane fragmentation pattern of m/z m/e ions for analysis and identification of  isopropyl chloride image diagram doc brown's advanced organic chemistry revision notes 

2-chloropropane  C3H7Cl  (c) doc b  (c) doc b  (c) doc b

The molecular structure and naming of haloalkanes

Interpreting the fragmentation pattern of the mass spectrum of 2-chloropropane

There are two molecular ion peaks [M]+ observed in the mass spectrum of 2-chloropropane.

The molecular ion peaks of M and M+2 with a m/z values of 78 and 80 corresponding to [C3H7Cl]+, the original 2-chloropropane molecule minus an electron

M peak of m/z 78 ion [CH3CH35ClCH3]+

M+2 peak of m/z 80 ion [CH3CH37ClCH3]+

Since chlorine has two common isotopes of 35Cl and 37Cl in the ratio 3 : 1, you should observe double peaks in the intensity ratio 3 : 1, two mass units apart for molecular fragments containing a chlorine atom from the fragmentation pattern of 2-chlorobutane.

This also applies to the molecular ion, so two molecular ions are observed at m/z 78 and 80.

The tiny M+1 peak at m/z 79, corresponds to an ionised 2-chloropropane molecule with one 13C atom in it i.e. an ionised 1-chloropropane molecule of formula [13C12C2H735Cl]+

Carbon-13 only accounts for ~1% of all carbon atoms (12C ~99%), but the more carbon atoms in the molecule, the greater the probability of observing this 13C M+1 peak.

2-chloropropane has 3 carbon atoms, so on average, ~1 in 33 molecules will contain a 13C atom.

The most abundant ion of the molecule under mass spectrometry investigation (2-chloropropane) is usually given an arbitrary abundance value of 100, called the base ion peak, and all other abundances ('intensities') are measured against it.

The base ion peak in the mass spectrum of 2-chloropropane is the m/z 43 ion [C3H7]+

Identifying the species giving the most prominent peaks (apart from M) in the fragmentation pattern of 2-chloropropane.

Parent molecular ion peaks are the m/z 78 ion [CH3CH35ClCH3]+ and m/z 80 ion [CH3CH37ClCH3]+

Unless otherwise indicated, assume the carbon atoms in 2-chloropropane are the 12C isotope.

m/z value of [fragment]+ 65 63 44 43 42 41
[molecular fragment]+ [CH3CH37Cl]+ [CH3CH35Cl]+ [C3H8]+ [C3H7]+ [C3H6]+ [C3H5]+
m/z value of [fragment]+ 40 39 29 28 27 26
[molecular fragment]+ [C3H4]+ [C3H3]+ [C2H5]+ [C2H4]+ [C2H3]+ [C2H2]+

Analysing and explaining the principal ions in the fragmentation pattern of the mass spectrum of 2-chloropropane

PLEASE NOTE I have found it difficult to find 'authentic' equations to explain mass spectra fragmentation patterns and it is complex chemistry! I've identified the formulae of the ionised fragments on the mass spectrum diagram, but the equations are from the internet or my conjecture as to how the ions might be formed - please take care in using the information, especially for assignments at university or pre-university level.

Atomic masses: H = 1; C = 12; Cl = 35 or 37 (3:1)

Bond enthalpies kJ/mol: C-C = 348;  C-Cl = 338;  C-H = 412

Equations to explain the most abundant ion peaks of 2-chloropropane

Formation of m/z 63 and 65 ions:

[CH3CHClCH3]+  ===>  [CH3CH35Cl]+  or  [CH3CH37Cl]+  +  CH3

C-C bond fission where the end methyl group has broken off.

Low probability because of the strong C-C bond enthalpy.

Note the expected 3:1 ratio of chlorine containing fragments.

Where R is alkyl, the double RCl m/z ion peaks of roughly 3 : 1 abundance ratio are characteristic of organo-chlorine compounds i.e. caused by the 3 : 1 isotope ratio of 35Cl : 37Cl.

Formation of m/z 44 ion:

[CH3CHClCH3]+  ===>  [C3H6]+  +  HCl

Elimination of hydrogen chloride from the parent molecular ion (but see below).

Formation of m/z 43 ion:

[CH3CHClCH3]+  ===>  [CH3CHCH3]+  +  Cl

Bond scission of the C-Cl bond, the weakest bond in the molecule.

The m/z 43 ion is the base peak ion, the most abundant and 'stable' ion fragment.

The m/z 44 ion is probably formed in the same way, but containing a 13C carbon isotope atom i.e. [13C12C2H7]+ and not [C3H8]+

An accurate mass spectrometer sorts this out, measuring relative fragment ion masses to four decimal places e.g. using very accurate relative isotopic masses,

12C = 12.0000  13C = 13.0034, 1H = 1.0078 from which you can calculate (predict) that the accurate relative ion masses are:

For m/z 44: [C3H8]+ = 44.0624  and [13C12C2H7]+ = 44.058, a difference of 0.0044 in relative ion mass.

The m/z 43 ion can lose hydrogen atoms to give the m/z 39, 41 and 42 ions (see data table).

Formation of m/z 42 ion:

[CH3CHClCH3]+  ===>  [CH3CHCH3]+  +  HCl

Elimination of hydrogen chloride.

Formation of m/z 41 ion:

[?]+  ===>  [C3H5]+  +  ?

Formation of m/z 39 ion:

[?]+  ===>  [C3H3]+  +  ?

Formation of m/z 27 ion:

[CH3CHCl]+  ===>  [C2H3]+  +  HCl

Elimination of hydrogen chloride from the m/z 63 and 65 ions.


(c) doc bSummary of key points for the mass spectrum of 2-chloropropane plus extra exam revision comments

The mass spectrum of 2-chloropropane (CH3CHClCH3) with precision, exam-board alignment, and misconception-busting clarity.


Key Features of the mass spectrum of 2-chloropropane

  • Molecular ion peaks: Two distinct peaks due to chlorine isotopes (35Cl and 37Cl).
  • Fragmentation pattern: Dominated by cleavage of the C–Cl bond and rearrangements forming stable carbocations.
  • Base peak: Typically at m/z = 43, representing the most stable and abundant fragment.

Prominent m/z Ions and Their Origins the mass spectrum of 2-chloropropane

m/z Fragment Ion Origin / Structure Notes
78 [CH3CH35ClCH3]+ Molecular ion with 35Cl Main molecular ion M⁺ peak
80 [CH3CH37ClCH3]+ Molecular ion with 37Cl M⁺ + 2 peak due to isotope
43 [CH3CHCH3]+ Propyl cation (loss of Cl) Base peak ion — most intense
63 [CH3CHCl]+ Loss of CH3 Contains Cl — isotope-sensitive
65 [CH3CH37Cl]+ Loss of CH3 with 37Cl M⁺ + 2 version of above
27 [C2H3]+ or [CH2CH]+ Rearranged fragment Often misunderstood — see below

Common Misconceptions about the mass spectrum of 2-chloropropane (see below too)

  • Confusing M⁺ and M⁺ + 2 peaks: Students often forget chlorine has two isotopes, leading to two molecular ion peaks at m/z = 78 and 80 in a 3:1 ratio.
  • Misidentifying the base peak: The most intense peak (m/z = 43) is not the molecular ion but a fragment — a common trap.
  • Overinterpreting low m/z peaks: Peaks like m/z = 27 may arise from rearrangements or secondary fragmentation, not simple bond cleavage.
  • Assuming all fragments retain the Cl atom: Many do not — especially the base peak.

Exam Revision Tips for questions involving the mass spectrum of 2-chloropropane (AQA, Edexcel, OCR, WJEC, CCEA, CIE, IB) (see above too)

  • Isotope awareness: Chlorine’s 3:1 ratio (35Cl:37Cl) is a frequent exam point — expect questions on M⁺ and M⁺ + 2 peak heights.
  • Base peak ≠ molecular ion: Know how to identify both — base peak is the tallest, molecular ion is the highest m/z with isotopic pair.
  • Fragmentation logic: Practice deducing fragments from bond cleavage and carbocation stability.
  • Compare spectra: Be ready to distinguish halogenoalkanes from alcohols or ketones based on fragmentation and isotope patterns.
  • Use data tables: Most boards provide m/z reference tables — use them to justify peak assignments.
  • Sketch fragmentation routes: Especially helpful for OCR and IB where mechanistic understanding is tested.

(c) doc bPractice questions based on the mass spectrum of 2-chloropropane

Three varied, technically rich multiple-choice questions on the mass spectrum of 2-chloropropane , designed for advanced pre-university chemistry students across AQA, Edexcel, OCR, WJEC, CCEA, CIE, IB, and US AP/Honors curricula.

These questions go beyond simple ion identification and explore isotopic patterns, fragmentation logic, and structural comparison with isomers.


Question 1: Isotopic Pattern Recognition based on the mass spectrum of 2-chloropropane

In the mass spectrum of 2-chloropropane, two molecular ion peaks are observed at m/z 78 and m/z 80 in a 3:1 ratio.

What does this pattern indicate?

  1. The molecule contains one chlorine atom, which has two isotopes with a 3:1 natural abundance ratio.
  2. The molecule contains two chlorine atoms, each contributing to the isotopic pattern.
  3. The molecule contains one bromine atom, which has a 3:1 isotope ratio.
  4. The molecule contains both chlorine and bromine atoms, producing overlapping isotope peaks.

Correct Answer: A

Explanation:

  • Chlorine has two major isotopes: ³⁵Cl (≈75%) and ³⁷Cl (≈25%)
  • A molecule with one chlorine atom shows a molecular ion (M⁺) and M+2 peak in a 3:1 ratio
  • 2-chloropropane contains one Cl atom, so the peaks at m/z 78 (³⁵Cl) and m/z 80 (³⁷Cl) confirm this

Distractor Analysis:

Option Why It’s Incorrect
B Two Cl atoms would give a 9:6:1 triplet pattern due to binomial distribution
C Bromine has a 1:1 isotope ratio (⁷⁹Br and ⁸¹Br), not 3:1
D 2-chloropropane contains only chlorine, not bromine

Question 2: Fragmentation Logic based on the mass spectrum of 2-chloropropane

A prominent fragment ion in the mass spectrum of 2-chloropropane appears at m/z 43. Which of the following best explains the formation of this fragment?

  1. Loss of chlorine radical to form a primary carbocation
  2. Loss of a methyl group to form a secondary carbocation
  3. Formation of a propyl cation after complete loss of chlorine and hydrogen
  4. Cleavage of the C–Cl bond to form CH3CH⁺CH3

Correct Answer: D

Explanation:

  • 2-chloropropane fragments by cleaving the C–Cl bond, forming a secondary carbocation: CH3CH⁺CH3
  • This ion has a mass of:
    • C2H5 = 29
    • CH3 = 15
      → Total = 43

This is a stable secondary carbocation, often the base peak in the spectrum.

Distractor Analysis:

Option Why It’s Incorrect
A A primary carbocation would be less stable and appear at m/z 29
B Loss of a methyl group would give m/z 63, not 43
C Complete loss of Cl and H would not yield a stable ion at m/z 43

Question 3: Isomer Differentiation by Fragmentation based on the mass spectrum of 2-chloropropane

Which of the following best explains why the mass spectrum of 2-chloropropane differs from that of 1-chloropropane, even though both have the same molecular formula?

  1. 2-chloropropane has a higher molecular ion peak than 1-chloropropane due to its branched structure
  2. 2-chloropropane forms a more stable secondary carbocation upon fragmentation, leading to a stronger base peak
  3. 1-chloropropane contains bromine, which alters its fragmentation pattern
  4. 2-chloropropane undergoes rearrangement to form an alkene, while 1-chloropropane does not

Correct Answer: B

Explanation:

  • Both isomers have the same molecular ion peak (m/z 78/80), but fragment differently
  • 2-chloropropane forms a secondary carbocation (CH3CH⁺CH3)m/z 43, highly stable
  • 1-chloropropane forms a primary carbocation (CH3CH2CH2⁺)m/z 43, less stable and less intense
  • This difference in carbocation stability leads to distinct base peaks

Distractor Analysis:

Option Why It’s Incorrect
A Both isomers have the same molecular ion mass; branching doesn’t affect M⁺ peak mass
C Neither molecule contains bromine
D Rearrangement to alkene is not the dominant fragmentation pathway in either isomer under EI conditions

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Links associated with 2-chloropropane

The infrared spectrum of 2-chloropropane

The H-1 NMR spectrum of 2-chloropropane

The C-13 NMR spectrum of 2-chloropropane

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